email: sswaminathan@bigelow.org
twitter: @SaraSwaminathan
github: https://github.com/saraswaminathan
website: www.saraswaminathan.com
cell: +1 352 514 0538
PhD – Environmental Engineering Sciences, University of Florida
2019 - 2024
Dissertation: Potential for Coral Reef Community Resilience in the Anthropocene
Faculty advisor: Andrew Altieri
GPA: 4.00/4.00
Bachelor of Arts – Science in Society Program, Wesleyan University
2013 - 2017
Minor: Art History
Postdoctoral Scientist
Bigelow Laboratory for Ocean Sciences
Advisor: Douglas Rasher
2024 - Present
STRI Fellow
Smithsonian Tropical Research Institute
Advisor: Matthieu Leray
2025 - Present
Graduate research assistant
Department of Environmental Engineering Sciences, University of Florida
Advisor: Andrew Altieri
2019 - 2024
Laboratory manager - Coral Ecophysiology and Ocean Acidification Lab
Department of Marine Biology and Ecology, RSMAS, University of Miami
Advisor: Chris Langdon
2018 - 2019
Research fellow – Bahamas Marine EcoCentre
Department of Marine Geosciences, RSMAS, University of Miami
Advisors: Pamela Reid, Amanda Oehlert
Independent research – Purkis Remote Sensing Lab
Department of Marine Geosciences, RSMAS, University of Miami
Advisor: Samuel Purkis
Independent research – Photomosaics Lab
Department of Marine Geosciences, RSMAS, University of Miami
Advisors: Art Gleason, Brooke Gintert
2022 Tropical Conservation and Development Travel Award, University of Florida Center for Latin American Studies ($500)
2020 Tropical Conservation and Development Field Research Award, University of Florida Center for Latin American Studies ($2500)
2020 Sally and William Glick Graduate Research Endowment, University of Florida Department of Environmental Engineering Sciences ($1500)
2019 National Science Foundation Graduate Research Fellowship Program (NSF GRFP) ($144,000)
2019 University of Florida Graduate Student Preeminence Award, University of Florida Graduate School ($36,000)
2018 Bahamas Marine EcoCentre Research Fellowship ($10,000)
Past and present research mentees are listed below:
“Recent
heatwave shifts coral reef communities in unexpected ways” Oral presentation; Western
Society of Naturalists meeting. 10 Nov 2023, Monterey, California.
“Stony
Coral Tissue Loss Disease alters coral reef communities” Oral presentation; Ecological
Society of America. 10 Aug 2023, Portland, Oregon.
“Stony
Coral Tissue Loss Disease threatens reef fish by altering benthic communities”
Oral presentation; North Florida Marine Science Symposium. 03 Mar 2023, Marineland,
Florida. Award for Best Graduate Student Oral Presentation.
“Stony Coral Tissue Loss Disease threatens reef fish by altering benthic communities” Oral presentation, Western Society of Naturalists annual meeting. 13 Nov 2022, Oxnard, California.
“Resilience of the Acropora cervicornis microbiome to hypoxia and host physiological stress” Oral
presentation, International Coral Reef Symposium. 06 July 2022, Bremen, Germany.
“Responses of benthic and reef fish assemblages to Stony Coral Tissue Loss Disease” Oral presentation, Benthic Ecology Meeting. 31 March 2022, Portsmouth, NH.
“Resilience of the coral microbiome to hypoxia and host physiological stress” Oral presentation,
Coastal Hypoxia
Research Program Advisory Committee Meeting
. 26 April 2021, Gainesville, FL.
“Light exposure mediates susceptibility of juvenile P. astreoides to oxygen depletion” Oral presentation,
Coastal Hypoxia
Research Program Advisory Committee Meeting. 10 April 2020, Gainesville, FL.
“Light exposure mediates susceptibility of juvenile P. astreoides to oxygen depletion” Poster presentation, North Florida Marine Science Symposium. 23 January 2020, Marineland, FL.
“Site and genotype influence success of A. cervicornis outplants in the Florida Keys” Oral presentation, Coastal Ecosystem Dynamics Seminar . 19 November 2019. Gainesville, FL.
“Assessing the relationship between Spirobranchus giganteus presence and health of coral hosts.” Oral presentation delivered to academic panel and local community. 05 December 2016. Center
for Marine Resource Studies, South Caicos, TCI.
github: https://github.com/saraswaminathan
website: www.saraswaminathan.com
cell: +1 352 514 0538
EDUCATION
PhD – Environmental Engineering Sciences, University of Florida
2019 - 2024
Dissertation: Potential for Coral Reef Community Resilience in the Anthropocene
Faculty advisor: Andrew Altieri
GPA: 4.00/4.00
Bachelor of Arts – Science in Society Program, Wesleyan University
2013 - 2017
Minor: Art History
PROFESSIONAL APPOINTMENTS
Postdoctoral Scientist
Bigelow Laboratory for Ocean Sciences
Advisor: Douglas Rasher
2024 - Present
STRI Fellow
Smithsonian Tropical Research Institute
Advisor: Matthieu Leray
2025 - Present
Graduate research assistant
Department of Environmental Engineering Sciences, University of Florida
Advisor: Andrew Altieri
2019 - 2024
Laboratory manager - Coral Ecophysiology and Ocean Acidification Lab
Department of Marine Biology and Ecology, RSMAS, University of Miami
Advisor: Chris Langdon
2018 - 2019
Research fellow – Bahamas Marine EcoCentre
Department of Marine Geosciences, RSMAS, University of Miami
Advisors: Pamela Reid, Amanda Oehlert
Independent research – Purkis Remote Sensing Lab
Department of Marine Geosciences, RSMAS, University of Miami
Advisor: Samuel Purkis
Independent research – Photomosaics Lab
Department of Marine Geosciences, RSMAS, University of Miami
Advisors: Art Gleason, Brooke Gintert
PUBLICATIONS
- Swaminathan SD, Lafferty KD, Knight NS, and Altieri AH (2024). Stony coral tissue loss disease indirectly alters reef communities. Science Advances, 10(18). https://doi.org/10.1126/sciadv.adk6808.
-
Swaminathan SD, Meyer JL, Johnson MD, Paul VJ, Bartels E and Altieri AH (2024) Divergent
- Johnson MD, Swaminathan SD, Nixon EN, Paul VJ, Altieri AH (2021) Differential susceptibility of reef- building corals to deoxygenation reveals remarkable hypoxia tolerance. Scientific Reports 11:23168. https://doi.org/10.1038/s41598-021-01078-9.
- Altieri AH, Johnson MD, Swaminathan SD, Nelson HR, Gedan KB (2020) Resilience of Tropical Ecosystems to Ocean Deoxygenation. Trends in Ecology & Evolution 36(3):227-238. doi: 10.1016/j.tree.2020.11.003.
- Swaminathan SD, Craig Z, Didderen K, Lengkeek W, Merck D, Muller E, Van Der Heide T, Altieri AH. Predator exclusion improves coral reef restoration success in a marine protected area. Restoration Ecology IN REVIEW
FUNDING, HONORS & AWARDS
2022 Tropical Conservation and Development Travel Award, University of Florida Center for Latin American Studies ($500)
2020 Tropical Conservation and Development Field Research Award, University of Florida Center for Latin American Studies ($2500)
2020 Sally and William Glick Graduate Research Endowment, University of Florida Department of Environmental Engineering Sciences ($1500)
2019 National Science Foundation Graduate Research Fellowship Program (NSF GRFP) ($144,000)
2019 University of Florida Graduate Student Preeminence Award, University of Florida Graduate School ($36,000)
2018 Bahamas Marine EcoCentre Research Fellowship ($10,000)
OUTREACH & MENTORING
- Workshop organizer – Boston High School Marine Science Symposium; Boston, MA April 2025
-
Facilitator
– Girls Who Code; Boothbay, Maine
- Mentor – Frost Science Museum IMPACT Program; Miami, FL 2018
-
Student teacher – Marine Research Club (middle and high
school); South Caicos, TCI 2016
Past and present research mentees are listed below:
- Alexandra Grant (2023 – present) – Current Masters student, Department of Environmental Engineering Sciences, University of Florida. Thesis title: Key Drivers of Growth and Survival for Coral Outplanting Success in the Florida Keys
- Julie Fernandez (2021 – present) – Current undergraduate research assistant, Department of Environmental Engineering Sciences, University of Florida. Thesis title: Responses of the Coral Microbiome to Warming and Deoxygenation
- Hailey Vaughan (2021 – 2022) – Former research assistant, Department of Environmental Engineering Sciences, University of Florida
- Garret O’Donnell (2021) – Current Knauss Fellow at National Oceanographic and Atmospheric Association
- Will Ferrell, Mikey Orense, Claire Hiaasen, Hunter Kaminski (2019 – 2020) - Former undergraduates at the University of Florida, Department of Environmental Engineering Sciences
- Tessa Vekich (2019-2020) – Former staff biologist at Smithsonian Marine Station (2019-2021)
- Emily Nixon (2019) – Current PhD Student at Scripps Oceanographic Institute
TEACHING EXPERIENCE
- Smithsonian Tropical Research Institution, McGill NEO program — Co-instructor, ENVR 451: Research in Panama, Summer 2025
-
Curriculum
development – Reefologies, an educational
card game about coral reef ecology for
middle/high school students, April 2025
CONFERENCE PRESENTATIONS & INVITED TALKS
TECHNICAL SKILLS
- Fieldwork: Over 300 AAUS research dives in the Florida Keys, Panama, Belize, Bonaire, French Polynesia. Field experiment design and deployment, underwater census methods (coral taxonomy and demography surveys, fish surveys, habitat surveys, benthic community surveys), underwater photography, biological sample collection, water quality instrument deployment. 5+ years boat operation experience. 5+ years of coral reefrestoration experience.
- Research
diving: AAUS
Scientific Diver since 2019. NAUI/SSI Drysuit diver since 2025. NAUI Master,
Rescue, & Nitrox certified since 2019. Advanced open water certified since
2016.
- Field
instrumentation: 8+
years experience with deployment, maintenance, calibration, and data management
of a variety of field instruments such as multiparameter YSI sondes, MiniDOT oxygen
and temperature loggers, light sensors, and temperature loggers.
- Laboratory
skills: 8+ years experience
with coral husbandry; wetlab mesocosm operation and maintenance for
multistressor experimentation; sampling/processing of coral tissue; fish
dissection and sample processing; Pulse-amplitude modulated (PAM) fluorometry.
- Molecular skills: Preparing samples from fish and corals for microbial analyses; Performing DNA extractions, PCR library preparation, Gel electrophoresis.
- Analytical
skills: Expertise
with Bayesian multilevel modeling, bioinformatics of metabarcoding data, multivariate
community analyses, image and video analysis of ecological datasets, and DNA
reference library curation; Highly proficient in R, data visualization, Bayesian
and frequentist statistical methods, LaTex, MATLAB, TagLab, ArcGIS, GitHub, Adobe
Creative Suite, Microsoft Office.